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5-Methylthiazole
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PDF
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Nitrogen and Sulfur
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Nuclear
Quadrupole Coupling Constants |
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in 5-Methylthiazole |
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Assuming Cs symmetry for
5-methylthiazole, one methyl CH bond lies in the plane of the thiazole
ring. Calculation of the nitrogen and sulfur nqcc's was made here
on B3PW91/6-31G(2d,2pd) optimized molecular structures corresponding to
each of two possible orientations of the methyl group: The in-plane CH bond
being either trans or cis with respect to the
sulfur atom. These calculated nitrogen nqcc's
are compared in Tables 1 and 2 with the experimental nqcc's of Jäger
and H.Mäder [1]. Calculated sulfur nqcc's are given in Tables 3 and
4. Calculated nitrogen nqcc's in the 33S isotopomer
are given in Table 5. Structure parameters are compared in Table
6. |
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Molecular energy: Etrans
< Ecis by 0.92 kcal/mol calculated at the B3PW91/6-31G(2d,2pd)
level of theory, 0.97 kcal/mol at B3PW91/ 6-311+G(df,pd), 0.89 kcal/mol
at B3LYP/6-311G(3df,3p), and 0.91 kcal/mol at B3LYP/TZV(3df,3p). |
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In Tables 1 and 5, subscripts a,b,c refer to the principal axes of the inertia
tensor, subscripts x,y,z to the principal axes of the nqcc tensor.
The nqcc y-axis is chosen coincident with the inertia c-axis, these
are perpendicular to the plane of the molecule. Ø (degrees)
is the angle between its subscripted parameters. ETA = (Xxx
- Xyy)/Xzz. RSD is the residual standard deviation
of calibration of the model for calculation of
the nqcc's. |
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Table 1. Nitrogen
nqcc's in 5-Methylthiazole-32S in the trans
conformer (MHz). Calculation was made
on the B3PW91/6-31G(2d,2pd) ropt structure. |
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Calc. |
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Expt. [1] |
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14N |
Xaa |
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1.164 |
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1.197(17) |
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Xbb |
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1.511 |
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1.514(14) |
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Xcc |
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2.675 |
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2.711(14) |
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|Xab| |
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2.899 |
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RMS |
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0.028 (1.6 %) |
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RSD |
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0.030 (1.3 %) |
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Xxx |
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1.567 |
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1.548 * |
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Xyy |
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2.675 |
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2.711 |
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Xzz |
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4.242 |
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4.259 |
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ETA |
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0.261 |
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0.273 |
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Øz,a |
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46.71 |
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46.56 |
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Øa,bi |
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45.89 |
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45.89 |
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Øz,bi** |
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0.82 |
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0.67 |
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* Calculated here from the experimental diagonal nqcc's
and the calculated |Xab|. |
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** Angle between the z-axis and the bisector ( 'bi' ) of the
CNC angle. |
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Table 2. Nitrogen
nqcc's in 5-Methylthiazole-32S in the cis
conformer (MHz). Calculation was made
on the B3PW91/6-31G(2d,2pd) ropt structure. |
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Calc. |
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Expt. [1] |
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14N |
Xaa |
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1.233 |
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1.197(17) |
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Xbb |
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1.482 |
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1.514(14) |
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Xcc |
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2.716 |
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2.711(14) |
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|Xab| |
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2.922 |
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RMS |
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0.028 (1.6 %) |
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RSD |
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0.030 (1.3 %) |
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Xxx |
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1.567 |
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1.571 * |
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Xyy |
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2.716 |
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2.711 |
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Xzz |
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4.283 |
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4.282 |
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ETA |
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0.268 |
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0.266 |
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Øz,a |
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46.22 |
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46.55 |
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Øa,bi |
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45.54 |
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45.54 |
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Øz,bi** |
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0.68 |
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1.01 |
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* Calculated here from the experimental diagonal nqcc's
and the calculated |Xab|. |
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** Angle between the z-axis and the bisector ( 'bi' ) of the
CNC angle. |
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Table 3.
33S nqcc's in 5-Methylthiazole in
the trans conformer (MHz). Calculation was made
on the B3PW91/6-31G(2d,2pd) ropt structure. |
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Calc. [a] B3LYP/6-311G(3df,3p) Model. |
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Calc. [b] B3LYP/TZV+(3df,3p)
Model. |
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Calc. [a]
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Calc. [b] |
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Expt. |
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Xaa |
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24.90 |
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25.05 |
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Xbb |
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4.78 |
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4.90 |
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Xcc |
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20.12 |
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20.16 |
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|Xab| |
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6.26 |
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6.24 |
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RSD |
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0.39 (1.7 %) |
0.35 (1.5 %) |
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Xxx |
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6.05 |
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6.14 |
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Xyy |
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20.12 |
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20.16 |
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Xzz |
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26.17 |
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26.30 |
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ETA |
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0.538 |
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0.533 |
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Øx,a |
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78.56 |
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78.69 |
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Øa,bi |
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80.93 |
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80.93 |
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Øx,bi* |
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2.37 |
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2.24 |
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* Angle between the x-axis and the bisector
( 'bi' ) of the CSC angle. |
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Table 4.
33S nqcc's in 5-Methylthiazole in
the cis conformer (MHz). Calculation was made
on the B3PW91/6-31G(2d,2pd) ropt structure. |
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Calc. [a] B3LYP/6-311G(3df,3p) Model. |
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Calc. [b] B3LYP/TZV+(3df,3p)
Model. |
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Calc. [a]
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Calc. [b] |
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Expt. |
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Xaa |
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24.31 |
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24.46 |
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Xbb |
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4.96 |
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5.10 |
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Xcc |
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19.34 |
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19.36 |
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|Xab| |
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6.73 |
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6.71 |
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RSD |
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0.39 (1.7 %) |
0.35 (1.5 %) |
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Xxx |
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6.44 |
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6.55 |
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Xyy |
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19.34 |
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19.36 |
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Xzz |
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25.78 |
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25.91 |
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ETA |
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0.500 |
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0.494 |
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Øx,a |
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77.65 |
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77.79 |
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Øa,bi |
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80.55 |
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80.55 |
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Øx,bi* |
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2.90 |
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2.76 |
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* Angle between the x-axis and the bisector
( 'bi' ) of the CSC angle. |
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Table 5. 14N nqcc's in 5-Methylthiazole-33S in
the cis and trans conformer (MHz). Calculation was made
on the B3PW91/6-31G(2d,2pd) ropt structure. |
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Calc/cis
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Calc/trans |
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Expt. |
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Xaa |
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1.145 |
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1.215 |
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Xbb |
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1.530 |
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1.501 |
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Xcc |
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2.675 |
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2.716 |
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|Xab| |
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2.898 |
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2.922 |
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RSD |
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0.030 (1.3 %) |
0.030 (1.3 %) |
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Table 6. 5-Methylthiazole. Structure parameters,
ropt (Å and degrees). |
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trans |
cis |
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S(1)C(2) |
1.7341 |
1.7310 |
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C(2)N(3) |
1.2966 |
1.2982 |
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N(3)C(4) |
1.3699 |
1.3683 |
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C(4)C(5) |
1.3659 |
1.3674 |
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C(5)S(1) |
1.7323 |
1.7291 |
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C(2)H(2) |
1.0816 |
1.0814 |
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C(5)C(6) |
1.0827 |
1.0827 |
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C(4)H(4) |
1.4926 |
1.4972 |
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C(6)H(7) |
1.0906 |
1.0895 |
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C(6)H(8,9) |
1.0924 |
1.0922 |
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C(5)S(1)C(2) |
89.49 |
89.71 |
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S(1)C(2)N(3) |
115.01 |
114.83 |
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C(2)N(3)C(4) |
110.19 |
110.29 |
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N(3)C(4)C(5) |
117.11 |
117.05 |
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C(4)C(5)S(1) |
108.20 |
108.12 |
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S(1)C(2)H(2) |
120.50 |
120.70 |
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N(3)C(4)H(4) |
119.11 |
118.94 |
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C(4)C(5)C(6) |
128.77 |
129.17 |
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C(5)C(6)H(7) |
109.62 |
111.75 |
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C(5)C(6)H(8,9) |
111.82 |
110.98 |
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[1] W.Jäger and H.Mäder, J.Mol.Struct. 190,295(1988). |
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Thiazole |
4-Fluorothiazole |
5-Fluorothiazole |
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2-Fluorothiazole |
2-Methylthiazole |
4-Methylthiazole |
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1,2,4-Thiadiazole |
1,2,5-Thiadiazole |
1,3,4-Thiadiazole |
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Pyrazole |
Imidazole |
Oxazole |
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Table of Contents |
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Molecules/Nitrogen |
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Molecules/Sulfur |
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5MeThiazole.html |
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Last
Modified 3 Oct 2004 |
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